Repository revision
9:10c5aa12a1d5

Repository 'mothur_get_communitytype'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/mothur_get_communitytype

Get.communitytype tool metadata
Miscellaneous
description
mothur_get_communitytype
toolshed.g2.bx.psu.edu/repos/iuc/mothur_get_communitytype/mothur_get_communitytype/1.39.5.0
1.39.5.0
mothur "#help()" | sed '7q;d' | cut -d" " -f2
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/mothur_get_communitytype/mothur_get_communitytype/1.39.5.0 (this tool)
toolshed.g2.bx.psu.edu/repos/iuc/mothur_get_communitytype/mothur_get_communitytype/1.36.1.0
mothur_get_communitytype
Requirements (dependencies defined in the <requirements> tag set)
name version type
mothur 1.39.5 package
Functional tests
name inputs outputs required files
Test-1 otu: final.tx.1.subsample.1.pick.shared
savelog: True
name: value
name: value
name: value
name: value
name: value
final.tx.1.subsample.1.pick.shared
value
Test-2 otu: final.tx.1.subsample.1.pick.shared
label: 1
groups: ['F003D000', 'F003D002', 'F003D006', 'F003D008', 'F003D142']
m|calc: manhattan
m|iters: 100
m|method: kmeans
maxpartitions: 4
subsample: 0
savelog: True
name: value
name: value
name: value
final.tx.1.subsample.1.pick.shared
value