Repository revision
1:a78bfd5264b1

Repository 'gemini_recessive_and_dominant'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/gemini_recessive_and_dominant

GEMINI autosomal recessive/dominant tool metadata
Miscellaneous
Find variants meeting an autosomal recessive/dominant model
gemini_recessive_and_dominant
toolshed.g2.bx.psu.edu/repos/iuc/gemini_recessive_and_dominant/gemini_recessive_and_dominant/0.18.1.0
0.18.1.0
gemini --version
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/gemini_recessive_and_dominant/gemini_recessive_and_dominant/0.18.1.1
toolshed.g2.bx.psu.edu/repos/iuc/gemini_recessive_and_dominant/gemini_recessive_and_dominant/0.18.1.0 (this tool)
gemini_recessive_and_dominant
Requirements (dependencies defined in the <requirements> tag set)
name version type
gemini 0.18.1 package
tabix 0.2.6 package
Functional tests
name inputs outputs required files
Test-1 lenient: True
report|report_selector: column_filter
rec_or_dom: dominant
report|columns: ['gene', 'chrom', 'impact']
infile: gemini_autosomal_input.db
outfile: gemini_autosomal_dominant_result.tabular
gemini_autosomal_input.db
gemini_autosomal_dominant_result.tabular
Test-2 lenient: True
report|report_selector: column_filter
rec_or_dom: recessive
report|columns: ['gene', 'chrom', 'impact']
infile: gemini_autosomal_input.db
outfile: gemini_autosomal_recessive.tabular
gemini_autosomal_input.db
gemini_autosomal_recessive.tabular