Repository revision

Revision: 0:cc18bac5afdb

Repository 'replace_column_by_key_value_file'

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/bgruening/replace_column_by_key_value_file

Replace column tool metadata

Miscellaneous

Name: Replace column

Description: by values which are defined in a convert file

Id: replace_column_with_key_value_file

Guid: toolshed.g2.bx.psu.edu/repos/bgruening/replace_column_by_key_value_file/replace_column_with_key_value_file/0.1

Version: 0.1

Version command string: None

Display in tool panel: True

Version lineage of this tool (guids ordered most recent to oldest)

toolshed.g2.bx.psu.edu/repos/bgruening/replace_column_by_key_value_file/replace_column_with_key_value_file/0.2

toolshed.g2.bx.psu.edu/repos/bgruening/replace_column_by_key_value_file/replace_column_with_key_value_file/0.1 (this tool)

replace_column_with_key_value_file

Requirements (dependencies defined in the <requirements> tag set)

No requirements defined

Functional tests

name

inputs

outputs

required files

Test-1

delimiter:
skip_lines: 1
replace_information: GRCh38_ensembl2UCSC.txt
column_replace: 1
original_file: original_file

outfile_replace: result_file

original_file
GRCh38_ensembl2UCSC.txt
result_file

Test-2

delimiter:
skip_lines: 1
replace_information: GRCh38_ensembl2UCSC.txt
column_replace: 1
original_file: empty_mapping

outfile_replace: result_file_empty_mapping

empty_mapping
GRCh38_ensembl2UCSC.txt
result_file_empty_mapping