Repository revision
17:c92d5ec5d8d7

Repository 'hyphy_busted'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/hyphy_busted

HyPhy-BUSTED tool metadata
Miscellaneous
HyPhy-BUSTED
Branch-site Unrestricted Statistical Test for Episodic Diversification
hyphy_busted
toolshed.g2.bx.psu.edu/repos/iuc/hyphy_busted/hyphy_busted/2.5.21+galaxy0
2.5.21+galaxy0
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/hyphy_busted/hyphy_busted/2.5.23+galaxy0
toolshed.g2.bx.psu.edu/repos/iuc/hyphy_busted/hyphy_busted/2.5.21+galaxy0 (this tool)
toolshed.g2.bx.psu.edu/repos/iuc/hyphy_busted/hyphy_busted/2.5.17+galaxy0
toolshed.g2.bx.psu.edu/repos/iuc/hyphy_busted/hyphy_busted/2.5.15+galaxy0
toolshed.g2.bx.psu.edu/repos/iuc/hyphy_busted/hyphy_busted/2.5.14+galaxy0
toolshed.g2.bx.psu.edu/repos/iuc/hyphy_busted/hyphy_busted/2.5.12+galaxy0
toolshed.g2.bx.psu.edu/repos/iuc/hyphy_busted/hyphy_busted/2.5.11+galaxy0
toolshed.g2.bx.psu.edu/repos/iuc/hyphy_busted/hyphy_busted/2.5.9+galaxy0
toolshed.g2.bx.psu.edu/repos/iuc/hyphy_busted/hyphy_busted/2.5.8+galaxy0
toolshed.g2.bx.psu.edu/repos/iuc/hyphy_busted/hyphy_busted/2.5.7+galaxy0
toolshed.g2.bx.psu.edu/repos/iuc/hyphy_busted/hyphy_busted/2.5.5+galaxy0
toolshed.g2.bx.psu.edu/repos/iuc/hyphy_busted/hyphy_busted/2.5.4+galaxy0
toolshed.g2.bx.psu.edu/repos/iuc/hyphy_busted/hyphy_busted/2.5.3+galaxy0
toolshed.g2.bx.psu.edu/repos/iuc/hyphy_busted/hyphy_busted/2.5.2+galaxy1
toolshed.g2.bx.psu.edu/repos/iuc/hyphy_busted/hyphy_busted/2.5.2+galaxy0
toolshed.g2.bx.psu.edu/repos/iuc/hyphy_busted/hyphy_busted/2.5.0+galaxy0
toolshed.g2.bx.psu.edu/repos/iuc/hyphy_busted/hyphy_busted/2.3.14+galaxy0
hyphy_busted
Requirements (dependencies defined in the <requirements> tag set)
name version type
hyphy 2.5.21 package
Additional information about this tool
ln -s '$input_file' busted_input.fa &&
        ln -s '$input_nhx' busted_input.nhx &&
        hyphy busted
            --alignment ./busted_input.fa
            --tree ./busted_input.nhx
            --code $gencodeid
            --branches '$branches'
            --output '$busted_output'
            > '$busted_log'
        
None
False
False
Functional tests
name inputs outputs required files
Test-1 input_file: absrel-in1.fa
input_nhx: absrel-in1.nhx
name: value
absrel-in1.fa
absrel-in1.nhx
value