Repository revision
4:ba3abde6775b

Repository 'gemini'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/gemini

GEMINI load tool metadata
Miscellaneous
GEMINI load
Loading a VCF file into GEMINI
gemini_load
toolshed.g2.bx.psu.edu/repos/iuc/gemini/gemini_load/0.10.1.0
0.10.1.0
gemini --version
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/gemini/gemini_load/0.10.1.0 (this tool)
toolshed.g2.bx.psu.edu/repos/iuc/gemini/gemini_load/0.10.0.0
gemini_load
Requirements (dependencies defined in the <requirements> tag set)
name version type
gemini 0.10.0 package
grabix 0.1.3 package
tabix 0.2.6 package
samtools 0.1.19 package
bedtools 2.19.1 package
Additional information about this tool
gemini 
            --annotation-dir ${annotation_databases.fields.path}
            load
            -v "${ infile }"
            #if str( $annotation_type ) != "None":
                -t $annotation_type
            #end if

            #if $ped:
                -p $ped
            #end if

            $skip_gerp_bp
            $skip_cadd
            $skip_gene_tables
            $no_load_genotypes
            $no_genotypes
            $passonly
            --cores \${GALAXY_SLOTS:-4}

            "${ outfile }"

    
None
False
Functional tests
name inputs outputs required files
Test-1