Repository revision
1:ddb463fdf57e

Repository 'msp_cap3'
hg clone https://toolshed.g2.bx.psu.edu/repos/drosofff/msp_cap3

cap3 tool metadata
Miscellaneous
cap3
Sequence Assembly tool
cap3
toolshed.g2.bx.psu.edu/repos/drosofff/msp_cap3/cap3/1.2.0
1.2.0
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/drosofff/msp_cap3/cap3/1.2.0 (this tool)
toolshed.g2.bx.psu.edu/repos/drosofff/msp_cap3/cap3/1.1.0
cap3
Requirements (dependencies defined in the <requirements> tag set)
name version type
cap3 3 package
Functional tests
name inputs outputs required files
Test-1 overlapidentity: 90
overlaplength: 40
inputSequences: input.fa
contigsandsinglets: contigsandsinglets.fa
cap3stdout: cap3stdout.txt
contigs: contigs.fa
contigsqual: contigsqual.txt
contigslink: contigslink.txt
ace: ace.txt
info: info.txt
singlets: singlets.fa
input.fa
contigsandsinglets.fa
cap3stdout.txt
contigs.fa
contigsqual.txt
contigslink.txt
ace.txt
info.txt
singlets.fa