Repository revision
21:7faadba7c625

Repository 'xcms_retcor'
hg clone https://toolshed.g2.bx.psu.edu/repos/lecorguille/xcms_retcor

xcms adjustRtime (retcor) tool metadata
Miscellaneous
Retention Time Correction
abims_xcms_retcor
toolshed.g2.bx.psu.edu/repos/lecorguille/xcms_retcor/abims_xcms_retcor/3.4.4.1
3.4.4.1
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/lecorguille/xcms_retcor/abims_xcms_retcor/3.6.1+galaxy0
toolshed.g2.bx.psu.edu/repos/lecorguille/xcms_retcor/abims_xcms_retcor/3.4.4.1 (this tool)
toolshed.g2.bx.psu.edu/repos/lecorguille/xcms_retcor/abims_xcms_retcor/3.4.4.0
toolshed.g2.bx.psu.edu/repos/lecorguille/xcms_retcor/abims_xcms_retcor/3.4.3.0
toolshed.g2.bx.psu.edu/repos/lecorguille/xcms_retcor/abims_xcms_retcor/3.0.0.0
toolshed.g2.bx.psu.edu/repos/lecorguille/xcms_retcor/abims_xcms_retcor/2.1.1
toolshed.g2.bx.psu.edu/repos/lecorguille/xcms_retcor/abims_xcms_retcor/2.1.0
toolshed.g2.bx.psu.edu/repos/lecorguille/xcms_retcor/abims_xcms_retcor/2.0.8
toolshed.g2.bx.psu.edu/repos/lecorguille/xcms_retcor/abims_xcms_retcor/2.0.7
toolshed.g2.bx.psu.edu/repos/lecorguille/xcms_retcor/abims_xcms_retcor/2.0.6
toolshed.g2.bx.psu.edu/repos/lecorguille/xcms_retcor/abims_xcms_retcor/2.0.5
toolshed.g2.bx.psu.edu/repos/lecorguille/xcms_retcor/abims_xcms_retcor/2.0.2
abims_xcms_retcor
Requirements (dependencies defined in the <requirements> tag set)
name version type
bioconductor-xcms 3.4.4 package
r-batch 1.1_4 package
r-rcolorbrewer 1.1_2 package
unzip 6.0 package
Functional tests
name inputs outputs required files
Test-1 methods|smooth_cond|smooth: loess
methods|minFraction: 1
image: faahKO-single-class.xset.group.RData
methods|smooth_cond|PeakGroupsSmoothLoessAdv|span: 0.2
file_load_section|file_load_conditional|file_load_select: yes
methods|smooth_cond|PeakGroupsSmoothLoessAdv|family: gaussian
file_load_section|file_load_conditional|input: ['wt15.CDF', 'ko16.CDF', 'ko15.CDF', 'wt16.CDF']
methods|extraPeaks: 1
methods|method: PeakGroups
faahKO-single-class.xset.group.RData
wt15.CDF
ko16.CDF
ko15.CDF
wt16.CDF