Repository revision
4:3ee0ef312022

Repository 'flye'
hg clone https://toolshed.g2.bx.psu.edu/repos/bgruening/flye

Flye assembly tool metadata
Miscellaneous
of long and error-prone reads
flye
toolshed.g2.bx.psu.edu/repos/bgruening/flye/flye/2.6
2.6
flye --version
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/bgruening/flye/flye/2.8.2+galaxy0
toolshed.g2.bx.psu.edu/repos/bgruening/flye/flye/2.6 (this tool)
toolshed.g2.bx.psu.edu/repos/bgruening/flye/flye/2.3.7
toolshed.g2.bx.psu.edu/repos/bgruening/flye/flye/2.3.5
flye
Requirements (dependencies defined in the <requirements> tag set)
name version type
flye 2.6 package
Functional tests
name inputs outputs required files
Test-1 inputs: nanopore.fasta
mode: --pacbio-raw
g: 10000
attributes: name
attributes: name
attributes: name
attributes: name
nanopore.fasta
name
Test-2 inputs: nanopore.fasta
mode: --nano-raw
g: 10000
attributes: name
attributes: name
attributes: name
attributes: name
nanopore.fasta
name
Test-3 i: 2
inputs: nanopore.fasta
g: 10000
mode: --nano-corr
asm: 40
attributes: name
attributes: name
attributes: name
attributes: name
nanopore.fasta
name
Test-4 inputs: nanopore.fasta
g: 10000
i: 1
plasmids: True
meta: True
mode: --pacbio-raw
attributes: name
attributes: name
attributes: name
attributes: name
nanopore.fasta
name