Repository revision
7:3c05abb4452e

Repository 'microsatellite_ngs'
hg clone https://toolshed.g2.bx.psu.edu/repos/arkarachai-fungtammasan/microsatellite_ngs

STR detection tool metadata
Miscellaneous
for short read, reference, and mapped data
microsatellite
toolshed.g2.bx.psu.edu/repos/arkarachai-fungtammasan/microsatellite_ngs/microsatellite/1.0.0
1.0.0
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/arkarachai-fungtammasan/microsatellite_ngs/microsatellite/1.0.0 (this tool)
microsatellite
Requirements (dependencies defined in the <requirements> tag set)
No requirements defined
Functional tests
name inputs outputs required files
Test-1 filePath: C_sample_fastq
minlength: 3
partialmotifs: True
period: 1
surfix: 5
prefix: 5
hammingThreshold: 0
multipleruns: True
microsatellite: C_sample_snoope
C_sample_fastq
C_sample_snoope