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Bakta tool metadata

Miscellaneous

Name: Bakta

Description: Bakta database builder

Id: bakta_build_database

Guid: toolshed.g2.bx.psu.edu/repos/iuc/data_manager_bakta/bakta_build_database/1.9.3+galaxy1

Version: 1.9.3+galaxy1

Version command string: None

Display in tool panel: False

Version lineage of this tool (guids ordered most recent to oldest)

toolshed.g2.bx.psu.edu/repos/iuc/data_manager_bakta/bakta_build_database/1.9.3+galaxy1 (this tool)

toolshed.g2.bx.psu.edu/repos/iuc/data_manager_bakta/bakta_build_database/1.9.3+galaxy0

toolshed.g2.bx.psu.edu/repos/iuc/data_manager_bakta/bakta_build_database/1.8.1+galaxy2

toolshed.g2.bx.psu.edu/repos/iuc/data_manager_bakta/bakta_build_database/1.8.1+galaxy1

toolshed.g2.bx.psu.edu/repos/iuc/data_manager_bakta/bakta_build_database/1.5.1+galaxy0

bakta_build_database

Requirements (dependencies defined in the <requirements> tag set)

Requirements:

name

version

type

python

3.8

package

requests

2.27.1

package

bakta

1.9.3

package

Additional information about this tool

Command:

python '$__tool_directory__/bakta_build_database.py'
    '$output_file'
    --database_version '$database_select'
    $test_data_manager

Interpreter: None

Forces a history refresh: False

Functional tests

name

inputs

outputs

required files

Test-1

database_select: 1.0
test_data_manager: --test

name: value

value

Test-2

database_select: 5.1_light
test_data_manager: --test

name: value

value

Test-3

database_select: 5.0_light
test_data_manager: --test

name: value

value

Test-4

database_select: 5.1_light
test_data_manager:

name: value

value