| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/jjohnson/samtools_filter/samtools_filter/1.1.1 (this tool) |
| toolshed.g2.bx.psu.edu/repos/jjohnson/samtools_filter/samtools_filter/1.1.0 |
| samtools_filter |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| samtools | 0.1.18 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
header: flag|reqBits: 0x0080 input1: bam_to_sam_in2.sam flag|filter: yes |
output1: None |
bam_to_sam_in2.sam |
| Test-2 |
header: read_group: rg1 input1: bam_to_sam_in2.sam flag|filter: no |
output1: None |
bam_to_sam_in2.sam |
| Test-3 |
header: flag|skipBits: 0x0008 input1: bam_to_sam_in1.sam mapq: 250 flag|filter: yes |
output1: None |
bam_to_sam_in1.sam |