Repository revision
1:137ede2b48c0

Repository 'concoct_cut_up_fasta'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/concoct_cut_up_fasta

CONCOCT: cut fasta contigs tool metadata
Miscellaneous
into equal length non-overlapping or overlapping parts
concoct_cut_up_fasta
toolshed.g2.bx.psu.edu/repos/iuc/concoct_cut_up_fasta/concoct_cut_up_fasta/1.0.0+galaxy1
1.0.0+galaxy1
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/concoct_cut_up_fasta/concoct_cut_up_fasta/1.1.0+galaxy0
toolshed.g2.bx.psu.edu/repos/iuc/concoct_cut_up_fasta/concoct_cut_up_fasta/1.0.0+galaxy1 (this tool)
toolshed.g2.bx.psu.edu/repos/iuc/concoct_cut_up_fasta/concoct_cut_up_fasta/1.0.0+galaxy0
concoct_cut_up_fasta
Requirements (dependencies defined in the <requirements> tag set)
name version type
biopython 1.79 package
concoct 1.0.0 package
pandas 0.19.2 package
Functional tests
name inputs outputs required files
Test-1 input_fasta: input.fasta.gz
name: value
input.fasta.gz
value
Test-2 input_fasta: input.fasta.gz
merge_last: True
output_bed_param: yes
name: value
name: value
input.fasta.gz
value
Test-3 input_fasta: input.fasta.gz
chunk_size: 500
overlap_size: 499
name: value
input.fasta.gz
value