Repository revision
6:b75f87deaa15

Repository 'hicexplorer_hicplotsvl'
hg clone https://toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicplotsvl

hicPlotSVL tool metadata
Miscellaneous
hicPlotSVL
plots the relation of short vs long range contacts
hicexplorer_hicplotsvl
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicplotsvl/hicexplorer_hicplotsvl/3.6+galaxy0
3.6+galaxy0
hicPlotSVL --version
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicplotsvl/hicexplorer_hicplotsvl/3.6+galaxy1
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicplotsvl/hicexplorer_hicplotsvl/3.6+galaxy0 (this tool)
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicplotsvl/hicexplorer_hicplotsvl/3.4.3.0
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicplotsvl/hicexplorer_hicplotsvl/3.4.2.0
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicplotsvl/hicexplorer_hicplotsvl/3.4.1.0
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicplotsvl/hicexplorer_hicplotsvl/3.3.1.0
hicexplorer_hicplotsvl
Requirements (dependencies defined in the <requirements> tag set)
name version type
hicexplorer 3.6 package
Functional tests
name inputs outputs required files
Test-1 matrix_h5_cooler_multiple: ['small_test_matrix.h5', 'small_test_matrix.h5']
distance: 2000000
chromosome_list_0|chromosomes: chr2L
chromosome_list_1|chromosomes: chr3L
chromosome_list_2|chromosomes: chr4
dpi: 10
image_file_format: png
name: value
name: value
name: value
small_test_matrix.h5
value