Repository revision
1:ec91f79c59bb

Repository 'hicexplorer_hicplotsvl'
hg clone https://toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicplotsvl

hicPlotSVL tool metadata
Miscellaneous
hicPlotSVL
plots the relation of short vs long range contacts
hicexplorer_hicplotsvl
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicplotsvl/hicexplorer_hicplotsvl/3.4.1.0
3.4.1.0
hicPlotSVL --version
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicplotsvl/hicexplorer_hicplotsvl/3.4.2.0
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicplotsvl/hicexplorer_hicplotsvl/3.4.1.0 (this tool)
toolshed.g2.bx.psu.edu/repos/bgruening/hicexplorer_hicplotsvl/hicexplorer_hicplotsvl/3.3.1.0
hicexplorer_hicplotsvl
Requirements (dependencies defined in the <requirements> tag set)
name version type
hicexplorer 3.4.1 package
Functional tests
name inputs outputs required files
Test-1 distance: 2000000
chromosome_list_0|chromosomes: chr2L
chromosome_list_1|chromosomes: chr3L
image_file_format: png
matrix_h5_cooler_multiple: ['small_test_matrix.h5', 'small_test_matrix.h5']
chromosome_list_2|chromosomes: chr4
dpi: 10
attributes: name
attributes: name
attributes: name
small_test_matrix.h5
name