Repository revision
2:2173ad5e7750

Repository 'corr_table'
hg clone https://toolshed.g2.bx.psu.edu/repos/melpetera/corr_table

Between-table Correlation tool metadata
Miscellaneous
Correlation table between two tables and graphic representation
corrtable
toolshed.g2.bx.psu.edu/repos/melpetera/corr_table/corrtable/1.0.0
1.0.0
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/melpetera/corr_table/corrtable/1.0.0 (this tool)
toolshed.g2.bx.psu.edu/repos/melpetera/corr_table/corrtable/0.0.0
corrtable
Requirements (dependencies defined in the <requirements> tag set)
name version type
r-batch 1.1_4 package
r-ggplot2 3.0.0 package
r-reshape2 1.4.3 package
Functional tests
name inputs outputs required files
Test-1 out_section|plot_cond|plot_choice: auto
out_section|reorder_var: no
corr_method: pearson
tab2_in: input1_tab2.txt
tab1_in: input1_tab1.tabular
out_section|plot_cond|heatmap_cond|typeclass_cond|type_classes: irregular
out_section|plot_cond|heatmap_cond|color_heatmap: yes
out_section|plot_cond|heatmap_cond|typeclass_cond|irreg_class_vect: (-0.8,-0.7,-0.5,-0.4,-0.3,-0.2,0,0.2,0.3,0.4,0.5,0.7,0.8)
tab1_samples: column
filter_section|filter_cond|filtchoice_cond|threshold: 0.3
tab2_samples: row
filter_section|filter_cond|filtchoice_cond|filters_choice: filters_0_thr
filter_section|filter_cond|filter: yes
filter_section|testcorr_cond|test_corr: no
attributes: name
attributes: name
input1_tab1.tabular
input1_tab2.txt
name
Test-2 out_section|plot_cond|plot_choice: auto
out_section|reorder_var: no
corr_method: pearson
tab2_in: input2_dataMatrix_500.txt
tab1_in: input2_dataMatrix_500.txt
out_section|plot_cond|heatmap_cond|color_heatmap: no
tab1_samples: column
filter_section|filter_cond|filtchoice_cond|threshold: 0.7
tab2_samples: column
filter_section|filter_cond|filtchoice_cond|filters_choice: filters_0_thr
filter_section|filter_cond|filter: yes
filter_section|testcorr_cond|test_corr: no
attributes: name
input2_dataMatrix_500.txt
name