Miscellaneous |
Version lineage of this tool (guids ordered most recent to oldest) |
toolshed.g2.bx.psu.edu/repos/melpetera/corr_table/corrtable/1.0.0 (this tool) |
toolshed.g2.bx.psu.edu/repos/melpetera/corr_table/corrtable/0.0.0 |
corrtable |
Requirements (dependencies defined in the <requirements> tag set) |
name | version | type |
r-batch | 1.1_4 | package |
r-ggplot2 | 3.0.0 | package |
r-reshape2 | 1.4.3 | package |
Functional tests |
name | inputs | outputs | required files |
Test-1 |
out_section|plot_cond|plot_choice: auto out_section|reorder_var: no corr_method: pearson tab2_in: input1_tab2.txt tab1_in: input1_tab1.tabular out_section|plot_cond|heatmap_cond|typeclass_cond|type_classes: irregular out_section|plot_cond|heatmap_cond|color_heatmap: yes out_section|plot_cond|heatmap_cond|typeclass_cond|irreg_class_vect: (-0.8,-0.7,-0.5,-0.4,-0.3,-0.2,0,0.2,0.3,0.4,0.5,0.7,0.8) tab1_samples: column filter_section|filter_cond|filtchoice_cond|threshold: 0.3 tab2_samples: row filter_section|filter_cond|filtchoice_cond|filters_choice: filters_0_thr filter_section|filter_cond|filter: yes filter_section|testcorr_cond|test_corr: no |
attributes: name attributes: name |
input1_tab1.tabular input1_tab2.txt name |
Test-2 |
out_section|plot_cond|plot_choice: auto out_section|reorder_var: no corr_method: pearson tab2_in: input2_dataMatrix_500.txt tab1_in: input2_dataMatrix_500.txt out_section|plot_cond|heatmap_cond|color_heatmap: no tab1_samples: column filter_section|filter_cond|filtchoice_cond|threshold: 0.7 tab2_samples: column filter_section|filter_cond|filtchoice_cond|filters_choice: filters_0_thr filter_section|filter_cond|filter: yes filter_section|testcorr_cond|test_corr: no |
attributes: name |
input2_dataMatrix_500.txt name |