| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/humann2_regroup_table/humann2_regroup_table/0.11.1.1 (this tool) |
| toolshed.g2.bx.psu.edu/repos/iuc/humann2_regroup_table/humann2_regroup_table/0.11.1.0 |
| toolshed.g2.bx.psu.edu/repos/iuc/humann2_regroup_table/humann2_regroup_table/0.9.9.0 |
| humann2_regroup_table |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| humann2 | 0.11.1 | package |
| Additional information about this tool |
humann2_regroup_table
--input '$input'
-o '$output_table'
--function '$function'
#if $built_in.built_in_test == "true":
--groups '$built_in.gene_family_groups.groups'
#else:
--custom '$built_in.custom'
$built_in.reversed
#end if
--precision '$precision'
--ungrouped '$ungrouped'
--protected '$protected'
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
input: demo_genefamilies.tsv function: sum built_in|gene_family_groups|groups: uniref90_rxn built_in|gene_family_groups|gene_family_type: uniref90 built_in|built_in_test: true precision: 3 ungrouped: True protected: True |
name: value |
demo_genefamilies.tsv value |