Repository revision
2:54b6b4d0613a

Repository 'hmmer3'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/hmmer3

hmmscan tool metadata
Miscellaneous
hmmscan
search sequence(s) against a profile database
hmmer_hmmscan
toolshed.g2.bx.psu.edu/repos/iuc/hmmer3/hmmer_hmmscan/0.1.0
0.1.0
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/hmmer3/hmmer_hmmscan/0.1.0 (this tool)
hmmer_hmmscan
Requirements (dependencies defined in the <requirements> tag set)
name version type
hmmer 3.1b1 package
Functional tests
name inputs outputs required files
Test-1 notextw: True
seed: 4
seqfile: dna_target.fa
hmmfile: MADE1.hmm
output: MADE1.out
tblout: MADE1.out.tblout
domtblout: MADE1.out.domtblout
pfamtblout: MADE1.out.pfamtblout
MADE1.hmm
dna_target.fa
MADE1.out
MADE1.out.tblout
MADE1.out.domtblout
MADE1.out.pfamtblout