Repository revision
2:54b6b4d0613a

Repository 'hmmer3'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/hmmer3

hmmsearch tool metadata
Miscellaneous
hmmsearch
search profile(s) against a sequence database
hmmer_hmmsearch
toolshed.g2.bx.psu.edu/repos/iuc/hmmer3/hmmer_hmmsearch/0.1.0
0.1.0
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/hmmer3/hmmer_hmmsearch/0.1.0 (this tool)
hmmer_hmmsearch
Requirements (dependencies defined in the <requirements> tag set)
name version type
hmmer 3.1b1 package
Functional tests
name inputs outputs required files
Test-1 notextw: True
seed: 4
seqdb: uniprot_matches.fasta
hmmfile: globins4.hmm
output: uniprot_globins_match.out
domtblout: globins.domtblout
pfamtblout: globins.pfamtblout
tblout: globins.tblout
globins4.hmm
uniprot_matches.fasta
uniprot_globins_match.out
globins.domtblout
globins.pfamtblout
globins.tblout