Repository revision
2:54b6b4d0613a

Repository 'hmmer3'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/hmmer3

jackhmmer tool metadata
Miscellaneous
jackhmmer
iteratively search a protein sequence against a protein database (PSIBLAST-like)
hmmer_jackhmmer
toolshed.g2.bx.psu.edu/repos/iuc/hmmer3/hmmer_jackhmmer/0.1.0
0.1.0
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/hmmer3/hmmer_jackhmmer/0.1.0 (this tool)
hmmer_jackhmmer
Requirements (dependencies defined in the <requirements> tag set)
name version type
hmmer 3.1b1 package
Functional tests
name inputs outputs required files
Test-1 notextw: True
seed: 4
seqfile: uniprot_matches.fasta
seqdb: globins45.fa
output: jackhmmer.out
domtblout: jackhmmer.domtblout
tblout: jackhmmer.tblout
uniprot_matches.fasta
globins45.fa
jackhmmer.out
jackhmmer.domtblout
jackhmmer.tblout