Repository revision
2:54b6b4d0613a

Repository 'hmmer3'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/hmmer3

phmmer tool metadata
Miscellaneous
phmmer
search a protein sequence against a protein database (BLASTP-like)
hmmer_phmmer
toolshed.g2.bx.psu.edu/repos/iuc/hmmer3/hmmer_phmmer/0.1.0
0.1.0
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/hmmer3/hmmer_phmmer/0.1.0 (this tool)
hmmer_phmmer
Requirements (dependencies defined in the <requirements> tag set)
name version type
hmmer 3.1b1 package
Functional tests
name inputs outputs required files
Test-1 notextw: True
seed: 4
seqfile: globins45.fa
seqdb: uniprot_matches.fasta
output: phmmer.out
domtblout: phmmer.domtblout
pfamtblout: phmmer.pfamtblout
tblout: phmmer.tblout
globins45.fa
uniprot_matches.fasta
phmmer.out
phmmer.domtblout
phmmer.pfamtblout
phmmer.tblout