| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/pretext_map/pretext_map/0.1.8+galaxy2 |
| toolshed.g2.bx.psu.edu/repos/iuc/pretext_map/pretext_map/0.1.8+galaxy1 (this tool) |
| toolshed.g2.bx.psu.edu/repos/iuc/pretext_map/pretext_map/0.1.8+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/iuc/pretext_map/pretext_map/0.1.7+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/iuc/pretext_map/pretext_map/0.1.6+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/iuc/pretext_map/pretext_map/0.1.5+galaxy0 |
| pretext_map |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| pretextmap | 0.1.8 | package |
| samtools | 1.13 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
input: test.bam sorting|sortorder: ascend sorting|sortby: length map_qual: 10 filter|filter_list: ref filter|filter_type: in |
name: value |
test.bam value |
| Test-2 |
input: test.sam sorting|sortorder: descend sorting|sortby: name filter|filter_list: chrM,chr8,chr9 filter|filter_type: out |
name: value |
test.sam value |