| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/vsearch/vsearch_masking/2.8.3.0 (this tool) |
| toolshed.g2.bx.psu.edu/repos/iuc/vsearch/vsearch_masking/1.9.7.0 |
| toolshed.g2.bx.psu.edu/repos/iuc/vsearch/vsearch_masking/1.1.3.1 |
| toolshed.g2.bx.psu.edu/repos/iuc/vsearch/vsearch_masking/1.1.3.0 |
| vsearch_masking |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| vsearch | 2.8.3 | package |
| Additional information about this tool |
vsearch
--threads "\${GALAXY_SLOTS:-4}"
--notrunclabels
#if str( $qmask ) != 'no':
--qmask "$qmask"
#end if
$hardmask
--maskfasta "$infile"
--output "$outfile"
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
infile: db.fasta qmask: dust hardmask: True |
name: value |
db.fasta value |
| Test-2 |
infile: db.fasta qmask: soft hardmask: True |
name: value |
db.fasta value |