Repository revision
2:6cf9f7f6509c

Repository 'ensembl_longest_cds_per_gene'
hg clone https://toolshed.g2.bx.psu.edu/repos/earlhaminst/ensembl_longest_cds_per_gene

Select longest CDS per gene tool metadata
Miscellaneous
from Ensembl CDS FASTA
ensembl_longest_cds_per_gene
toolshed.g2.bx.psu.edu/repos/earlhaminst/ensembl_longest_cds_per_gene/ensembl_longest_cds_per_gene/0.0.2
0.0.2
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/earlhaminst/ensembl_longest_cds_per_gene/ensembl_longest_cds_per_gene/0.0.2 (this tool)
toolshed.g2.bx.psu.edu/repos/earlhaminst/ensembl_longest_cds_per_gene/ensembl_longest_cds_per_gene/0.0.1
ensembl_longest_cds_per_gene
Requirements (dependencies defined in the <requirements> tag set)
No requirements defined
Functional tests
name inputs outputs required files
Test-1 input: Mus_musculus.GRCm38.cds.first100.fa
output: Mus_musculus.GRCm38.cds.longest.fa
Mus_musculus.GRCm38.cds.first100.fa
Mus_musculus.GRCm38.cds.longest.fa