| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/bgruening/glimmer_not_knowledge_based/glimmer_not_knowledge_based/3.02 (this tool) |
| glimmer_not_knowledge_based |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| glimmer | 3.02 | package |
| biopython | 1.70 | package |
| Additional information about this tool |
python '$__tool_directory__/glimmer_wo_icm.py'
'$input'
#if $report:
'$prediction'
#else:
'None'
#end if
#if $detailed_report:
'$detailed'
#else:
'None'
#end if
$overlap
$gene_length
$threshold
$linear
'$genes_output'
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
input: streptomyces_Tue6071_plasmid_genomic.fasta overlap: 0 gene_length: 110 threshold: 30 linear: True detailed_report: True report: True |
name: value |
streptomyces_Tue6071_plasmid_genomic.fasta value |