| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/data_manager_mash_sketch_builder/mash_sketch_builder/2.1+galaxy0 (this tool) |
| mash_sketch_builder |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| mash | 2.1 | package |
| python | 3.7 | package |
| Additional information about this tool |
python '$__tool_directory__/mash_sketch_builder.py'
'${out_file}'
--threads \${GALAXY_SLOTS:-1}
#if str( $input_sequence_source.input_sequence_source_selector ) == "tool_data_table":
--fasta '${input_sequence_source.input_sequence.fields.path}'
#elif str( $input_sequence_source.input_sequence_source_selector ) == 'history':
--fasta '${input_sequence_source.input_sequence}'
#end if
--sketch-name '${sketch_name}'
--sketch-size '${sketch_size}'
--kmer-size '${kmer_size}'
--probability-threshold '${probability_threshold}'
${individual_sequences}
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
input_sequence_source|input_sequence: test_assembly.fasta input_sequence_source|input_sequence_source_selector: history sketch_name: Test Sketch |
name: value |
test_assembly.fasta value |