| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/proteinortho_grab_proteins/proteinortho_grab_proteins/6.3.1+galaxy0 (this tool) |
| toolshed.g2.bx.psu.edu/repos/iuc/proteinortho_grab_proteins/proteinortho_grab_proteins/6.3.1+galaxy2 |
| toolshed.g2.bx.psu.edu/repos/iuc/proteinortho_grab_proteins/proteinortho_grab_proteins/6.2.3+galaxy2 |
| toolshed.g2.bx.psu.edu/repos/iuc/proteinortho_grab_proteins/proteinortho_grab_proteins/6.2.3+galaxy1 |
| toolshed.g2.bx.psu.edu/repos/iuc/proteinortho_grab_proteins/proteinortho_grab_proteins/6.1.2+galaxy1 |
| toolshed.g2.bx.psu.edu/repos/iuc/proteinortho_grab_proteins/proteinortho_grab_proteins/6.0.32+galaxy0 |
| toolshed.g2.bx.psu.edu/repos/iuc/proteinortho_grab_proteins/proteinortho_grab_proteins/6.0.31+galaxy1 |
| toolshed.g2.bx.psu.edu/repos/iuc/proteinortho_grab_proteins/proteinortho_grab_proteins/6.0.31+galaxy0 |
| proteinortho_grab_proteins |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| proteinortho | 6.3.1 | package |
| diamond | 2.1.8 | package |
| blast | 2.15.0 | package |
| ucsc-blat | 445 | package |
| last | 1519 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
input_files: ['L.fasta', 'C.fasta', 'C2.fasta', 'E.fasta', 'M.fasta'] query|querystring: E_1 query|querytype: string |
L.fasta C.fasta C2.fasta E.fasta M.fasta |
|
| Test-2 |
input_files: ['L.fasta', 'C.fasta', 'C2.fasta', 'E.fasta', 'M.fasta'] query|querystring: M..2 query|querytype: string regex: True source: True |
L.fasta C.fasta C2.fasta E.fasta M.fasta |
|
| Test-3 |
input_files: ['L.fasta', 'C.fasta', 'C2.fasta', 'E.fasta', 'M.fasta'] query|queryfile: result.proteinortho.tsv query|querytype: file |
L.fasta C.fasta C2.fasta E.fasta M.fasta result.proteinortho.tsv |