Repository revision
5:37abd09a0ae6

Repository 'metilene'
hg clone https://toolshed.g2.bx.psu.edu/repos/rnateam/metilene

metilene tool metadata
Miscellaneous
metilene
calling differentially methylated regions from bisulfite sequencing data
metilene
toolshed.g2.bx.psu.edu/repos/rnateam/metilene/metilene/0.2.6.1
0.2.6.1
echo "0.2.6"
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/rnateam/metilene/metilene/0.2.6.1 (this tool)
toolshed.g2.bx.psu.edu/repos/rnateam/metilene/metilene/0.2.6.0
toolshed.g2.bx.psu.edu/repos/rnateam/metilene/metilene/0.2-4.1
toolshed.g2.bx.psu.edu/repos/rnateam/metilene/metilene/0.2-4.0
metilene
Requirements (dependencies defined in the <requirements> tag set)
name version type
metilene 0.2.6 package
r-base 3.5.1 package
bedtools 2.24 package
coreutils 8.25 package
Functional tests
name inputs outputs required files
Test-1 opt_in2: ['example_S5.bedgraph', 'example_S6.bedgraph', 'example_S7.bedgraph', 'example_S8.bedgraph']
opt_in1: ['example_S1.bedgraph', 'example_S2.bedgraph', 'example_S3.bedgraph', 'example_S4.bedgraph']
attributes: name
example_S1.bedgraph
example_S2.bedgraph
example_S3.bedgraph
example_S4.bedgraph
example_S5.bedgraph
example_S6.bedgraph
example_S7.bedgraph
example_S8.bedgraph
name