Repository revision
14:be3f26533209

Repository 'trinity_contig_exn50_statistic'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/trinity_contig_exn50_statistic

Compute contig Ex90N50 statistic and Ex90 transcript count tool metadata
Miscellaneous
Compute contig Ex90N50 statistic and Ex90 transcript count
from a Trinity assembly
trinity_contig_exn50_statistic
toolshed.g2.bx.psu.edu/repos/iuc/trinity_contig_exn50_statistic/trinity_contig_exn50_statistic/2.9.1
2.9.1
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/trinity_contig_exn50_statistic/trinity_contig_exn50_statistic/2.15.1+galaxy0
toolshed.g2.bx.psu.edu/repos/iuc/trinity_contig_exn50_statistic/trinity_contig_exn50_statistic/2.9.1 (this tool)
toolshed.g2.bx.psu.edu/repos/iuc/trinity_contig_exn50_statistic/trinity_contig_exn50_statistic/2.8.5
toolshed.g2.bx.psu.edu/repos/iuc/trinity_contig_exn50_statistic/trinity_contig_exn50_statistic/2.8.4
toolshed.g2.bx.psu.edu/repos/iuc/trinity_contig_exn50_statistic/trinity_contig_exn50_statistic/2.8.3
toolshed.g2.bx.psu.edu/repos/iuc/trinity_contig_exn50_statistic/trinity_contig_exn50_statistic/2.6.6
toolshed.g2.bx.psu.edu/repos/iuc/trinity_contig_exn50_statistic/trinity_contig_exn50_statistic/2.4.0.0
toolshed.g2.bx.psu.edu/repos/iuc/trinity_contig_exn50_statistic/trinity_contig_exn50_statistic/2.2.0.0
trinity_contig_exn50_statistic
Requirements (dependencies defined in the <requirements> tag set)
name version type
trinity 2.9.1 package
Functional tests
name inputs outputs required files
Test-1 matrix: count/contig_exn50_statistic/matrix.TMM.EXPR.matrix
transcripts: count/contig_exn50_statistic/Trinity.fasta
 name: value
 count/contig_exn50_statistic/matrix.TMM.EXPR.matrix
count/contig_exn50_statistic/Trinity.fasta
value