Repository revision
36:0a5c785ac6db

Repository 'bedtools'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/bedtools

bedtools SubtractBed tool metadata
Miscellaneous
remove intervals based on overlaps
bedtools_subtractbed
toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_subtractbed/2.29.2
2.29.2
bedtools --version
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_subtractbed/2.29.2 (this tool)
toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_subtractbed/2.19.0
bedtools_subtractbed
Requirements (dependencies defined in the <requirements> tag set)
name version type
bedtools 2.29.2 package
Functional tests
name inputs outputs required files
Test-1 inputB: subtractBed2.bed
inputA: subtractBed1.bed
attributes: name
subtractBed1.bed
subtractBed2.bed
name
Test-2 inputB: subtractBed2.bed
inputA: subtractBed1.bed
overlap: 0.80
attributes: name
subtractBed1.bed
subtractBed2.bed
name
Test-3 inputB: subtractBed2.bed
removeIfOverlap: -A
inputA: subtractBed1.bed
attributes: name
subtractBed1.bed
subtractBed2.bed
name