Miscellaneous |
Version lineage of this tool (guids ordered most recent to oldest) |
toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_map/2.29.0.2 |
toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_map/2.27.1.2 (this tool) |
toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_map/2.27.0.1 |
toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_map/2.27.0.0 |
toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_map/2.26.0.1 |
toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_map/2.26.0.0 |
toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_map/2.24.1 |
toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_map/2.22.1 |
toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_map/2.22.0 |
toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_map/2.19.0 |
bedtools_map |
Requirements (dependencies defined in the <requirements> tag set) |
name | version | type |
bedtools | 2.27.1 | package |
Functional tests |
name | inputs | outputs | required files |
Test-1 |
inputB: mapBed2.bed c_and_o_argument_repeat_0|col: 5 c_and_o_argument_repeat_0|operation: mean inputA: mapBed1.bed |
attributes: name |
mapBed1.bed mapBed2.bed name |
Test-2 |
inputB: mapBed2.bed c_and_o_argument_repeat_0|col: 5 c_and_o_argument_repeat_0|operation: collapse inputA: mapBed1.bed |
attributes: name |
mapBed1.bed mapBed2.bed name |
Test-3 |
inputB: mapBed2.bed c_and_o_argument_repeat_0|col: 5 c_and_o_argument_repeat_0|operation: collapse inputA: mapBed1.bed strand: -S |
attributes: name |
mapBed1.bed mapBed2.bed name |
Test-4 |
inputB: mapBed2.bed c_and_o_argument_repeat_0|col: 5 c_and_o_argument_repeat_0|operation: collapse inputA: mapBed1.bed strand: -s |
attributes: name |
mapBed1.bed mapBed2.bed name |
Test-5 |
genome|genome_file_opts|genome: mm9.len genome|genome_file_opts|genome_file_opts_selector: hist inputB: mapBed4.bed c_and_o_argument_repeat_0|col: 5 genome|genome_choose: -g inputA: mapBed3.bed c_and_o_argument_repeat_0|operation: collapse strand: -s |
attributes: name |
mapBed3.bed mapBed4.bed mm9.len name |