Repository revision
33:87ee588b3d45

Repository 'bedtools'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/bedtools

bedtools ShuffleBed tool metadata
Miscellaneous
randomly redistrubute intervals in a genome
bedtools_shufflebed
toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_shufflebed/2.27.1
2.27.1
bedtools --version
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_shufflebed/2.27.1 (this tool)
toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_shufflebed/2.19.0
bedtools_shufflebed
Requirements (dependencies defined in the <requirements> tag set)
name version type
bedtools 2.27.1 package
Functional tests
name inputs outputs required files
Test-1 genome_file_opts|genome: shuffleBed.len
genome_file_opts|genome_file_opts_selector: hist
seed|seed: 1
inputA: shuffleBed1.bed
seed|seed_choose: True
chrom: False
attributes: name
shuffleBed1.bed
shuffleBed.len
name
Test-2 genome_file_opts|genome: shuffleBed.len
genome_file_opts|genome_file_opts_selector: hist
seed|seed: 1
inputA: shuffleBed1.bed
seed|seed_choose: True
chrom: True
attributes: name
shuffleBed1.bed
shuffleBed.len
name
Test-3 genome_file_opts|genome_file_opts_selector: hist
genome_file_opts|genome: shuffleBed.len
seed|seed_choose: True
seed|seed: 1
inputA: shuffleBed1.bed
attributes: name
shuffleBed1.bed
shuffleBed.len
name
Test-4 allow_beyond: True
genome_file_opts|genome: shuffleBed.len
genome_file_opts|genome_file_opts_selector: hist
seed|seed: 1
inputA: shuffleBed1.bed
seed|seed_choose: True
attributes: name
shuffleBed1.bed
shuffleBed.len
name