| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_flankbed/2.30.0+galaxy1 (this tool) |
| toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_flankbed/2.30.0 |
| toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_flankbed/2.29.2 |
| toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_flankbed/2.29.0 |
| toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_flankbed/2.27.1 |
| toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_flankbed/2.19.0 |
| bedtools_flankbed |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| bedtools | 2.30.0 | package |
| Additional information about this tool |
flankBed
$pct
$strand
#if $genome_file_opts.genome
-g
#if $genome_file_opts.genome_file_opts_selector == "loc":
'$genome_file_opts.genome.fields.len_path'
#elif $genome_file_opts.genome_file_opts_selector == "hist":
'$genome_file_opts.genome'
#end if
#end if
-i '$input'
#if $addition.addition_select == 'b':
-b $addition.b
#else:
-l $addition.l
-r $addition.r
#end if
> '$output'
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
input: a.bed genome_file_opts|genome: mm9_chr1.len genome_file_opts|genome_file_opts_selector: hist addition|b: 5 addition|addition_select: b |
name: value |
a.bed mm9_chr1.len value |
| Test-2 |
input: a.bed genome_file_opts|genome: mm9_chr1.len genome_file_opts|genome_file_opts_selector: hist addition|l: 2 addition|r: 3 addition|addition_select: lr |
name: value |
a.bed mm9_chr1.len value |