Miscellaneous |
Version lineage of this tool (guids ordered most recent to oldest) |
toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_sortbed/2.30.0+galaxy2 (this tool) |
toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_sortbed/2.19.0 |
bedtools_sortbed |
Requirements (dependencies defined in the <requirements> tag set) |
name | version | type |
bedtools | 2.30.0 | package |
Additional information about this tool |
sortBed -i '$input' $option #if $genome_file_opts.genome -g #if $genome_file_opts.genome_file_opts_selector == "loc": '$genome_file_opts.genome.fields.len_path' #elif $genome_file_opts.genome_file_opts_selector == "hist": '$genome_file_opts.genome' #end if #end if > '$output'
Functional tests |
name | inputs | outputs | required files |
Test-1 |
input: sortBed1.bed option: |
name: value |
sortBed1.bed value |
Test-2 |
input: sortBed2.bed option: |
name: value |
sortBed2.bed value |
Test-3 |
input: sortBed2.bed option: genome_file_opts|genome: mm9.len genome_file_opts|genome_file_opts_selector: hist |
name: value |
sortBed2.bed mm9.len value |