Repository revision
37:ce3c7f062223

Repository 'bedtools'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/bedtools

bedtools SubtractBed tool metadata
Miscellaneous
remove intervals based on overlaps
bedtools_subtractbed
toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_subtractbed/2.30.0
2.30.0
bedtools --version
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_subtractbed/2.30.0 (this tool)
toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_subtractbed/2.19.0
bedtools_subtractbed
Requirements (dependencies defined in the <requirements> tag set)
name version type
bedtools 2.30.0 package
Functional tests
name inputs outputs required files
Test-1 inputA: subtractBed1.bed
inputB: subtractBed2.bed
name: value
subtractBed1.bed
subtractBed2.bed
value
Test-2 inputA: subtractBed1.bed
inputB: subtractBed2.bed
overlap: 0.80
name: value
subtractBed1.bed
subtractBed2.bed
value
Test-3 inputA: subtractBed1.bed
inputB: subtractBed2.bed
removeIfOverlap: -A
name: value
subtractBed1.bed
subtractBed2.bed
value