| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_closestbed/2.27.0.0 |
| toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_closestbed/2.26.0.0 (this tool) |
| toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_closestbed/2.24.0 |
| toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_closestbed/2.22.0 |
| toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_closestbed/2.19.0 |
| bedtools_closestbed |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| bedtools | 2.26.0gx | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
inputA: closestBedA.bed overlap_with|source: history overlap_with|inputB: closestBedB.bed |
output: closestBed_result1.bed |
closestBedA.bed closestBedB.bed closestBed_result1.bed |
| Test-2 |
addition: True inputA: closestBed_a.bed overlap_with|source: history overlap_with|inputB: ['closestBed_b1.bed', 'closestBed_b2.bed'] |
output: closestBed_result2.bed |
closestBed_a.bed closestBed_b1.bed closestBed_b2.bed closestBed_result2.bed |
| Test-3 |
addition: True mdb: all inputA: closestBed_a.bed overlap_with|source: history overlap_with|inputB: ['closestBed_b1.bed', 'closestBed_b2.bed'] |
output: closestBed_result3.bed |
closestBed_a.bed closestBed_b1.bed closestBed_b2.bed closestBed_result3.bed |
| Test-4 |
addition2|addition2_select: ref inputA: closestBed_c.bed overlap_with|source: history overlap_with|inputB: closestBed_d.bed |
output: closestBed_result4.bed |
closestBed_c.bed closestBed_d.bed closestBed_result4.bed |
| Test-5 |
addition2|addition2_select: a inputA: closestBed_c.bed overlap_with|source: history overlap_with|inputB: closestBed_d.bed |
output: closestBed_result5.bed |
closestBed_c.bed closestBed_d.bed closestBed_result5.bed |
| Test-6 |
k: 3 inputA: closestBedA.bed overlap_with|source: history overlap_with|inputB: a.bed |
output: closestBed_result6.bed |
closestBedA.bed a.bed closestBed_result6.bed |