Repository revision
16:e0cec48a4695

Repository 'bedtools'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/bedtools

WindowBed tool metadata
Miscellaneous
WindowBed
find overlapping intervals within a window around an interval
bedtools_windowbed
toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_windowbed/2.26.0.0
2.26.0.0
bedtools --version
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_windowbed/2.27.0.0
toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_windowbed/2.26.0.0 (this tool)
toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_windowbed/2.24.0
toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_windowbed/2.22.0
toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_windowbed/2.19.0
bedtools_windowbed
Requirements (dependencies defined in the <requirements> tag set)
name version type
bedtools 2.26.0gx package
Functional tests
name inputs outputs required files
Test-1 inputB: windowBedB.bed
inputA: windowBedA.bed
output: windowBed_result1.bed
windowBedA.bed
windowBedB.bed
windowBed_result1.bed
Test-2 inputB: windowBedB.bed
addition|w: 5000
inputA: windowBedA.bed
addition|addition_select: window
output: windowBed_result2.bed
windowBedA.bed
windowBedB.bed
windowBed_result2.bed
Test-3 inputB: windowBedB.bed
addition|l: 200
inputA: windowBedA.bed
addition|r: 20000
addition|addition_select: lr
output: windowBed_result2.bed
windowBedA.bed
windowBedB.bed
windowBed_result2.bed