Repository revision
30:db1841942d2b

Repository 'bedtools'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/bedtools

Intersect intervals tool metadata
Miscellaneous
find overlapping intervals in various ways
bedtools_intersectbed
toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_intersectbed/2.27.0.2
2.27.0.2
bedtools --version
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_intersectbed/2.27.0.2 (this tool)
toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_intersectbed/2.19.0
bedtools_intersectbed
Requirements (dependencies defined in the <requirements> tag set)
name version type
bedtools 2.27.0 package
Functional tests
name inputs outputs required files
Test-1 overlap_mode: -wa
inputA: intersectBed1.bed
reduce_or_iterate|inputB: intersectBed2.bed
split: False
attributes: name
intersectBed1.bed
intersectBed2.bed
name
Test-2 overlap_mode: ['-wa', '-wb']
inputA: intersectBed1.bed
reduce_or_iterate|inputB: intersectBed2.bed
split: False
attributes: name
intersectBed1.bed
intersectBed2.bed
name
Test-3 invert: True
inputA: intersectBed1.bed
reduce_or_iterate|inputB: intersectBed2.bed
split: False
attributes: name
intersectBed1.bed
intersectBed2.bed
name