Repository revision
33:87ee588b3d45

Repository 'bedtools'
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/bedtools

bedtools MaskFastaBed tool metadata
Miscellaneous
use intervals to mask sequences from a FASTA file
bedtools_maskfastabed
toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_maskfastabed/2.27.1
2.27.1
bedtools --version
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_maskfastabed/2.27.1 (this tool)
toolshed.g2.bx.psu.edu/repos/iuc/bedtools/bedtools_maskfastabed/2.19.0
bedtools_maskfastabed
Requirements (dependencies defined in the <requirements> tag set)
name version type
bedtools 2.27.1 package
Functional tests
name inputs outputs required files
Test-1 input: nucBed1.bed
fasta: nucBed1.fasta
soft: False
attributes: name
nucBed1.bed
nucBed1.fasta
name
Test-2 input: nucBed1.bed
fasta: nucBed1.fasta
soft: True
attributes: name
nucBed1.bed
nucBed1.fasta
name
Test-3 input: nucBed1.bed
fasta: nucBed1.fasta
soft: True
fullheader: True
attributes: name
nucBed1.bed
nucBed1.fasta
name