Repository revision
0:7e572e148175

Repository 'gffcompare_to_bed'
hg clone https://toolshed.g2.bx.psu.edu/repos/galaxyp/gffcompare_to_bed

Convert gffCompare annotated GTF to BED tool metadata
Miscellaneous
for StringTie results
gffcompare_to_bed
toolshed.g2.bx.psu.edu/repos/galaxyp/gffcompare_to_bed/gffcompare_to_bed/0.1.0
0.1.0
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/galaxyp/gffcompare_to_bed/gffcompare_to_bed/0.2.0
toolshed.g2.bx.psu.edu/repos/galaxyp/gffcompare_to_bed/gffcompare_to_bed/0.1.0 (this tool)
gffcompare_to_bed
Requirements (dependencies defined in the <requirements> tag set)
No requirements defined
Functional tests
name inputs outputs required files
Test-1 input: gffcompare_annotated.gtf
name: value
gffcompare_annotated.gtf
value
Test-2 input: gffcompare_annotated.gtf
class_codes: j
name: value
gffcompare_annotated.gtf
value
Test-3 input: gffcompare_annotated.gtf
class_codes: ['j', 'e', 'i', 'p', 'u', 'x']
name: value
gffcompare_annotated.gtf
value