Galaxy |

IDMassAccuracy tool metadata

Miscellaneous

Name: IDMassAccuracy

Description: Calculates a distribution of the mass error from given mass spectra and IDs.

Id: IDMassAccuracy

Guid: toolshed.g2.bx.psu.edu/repos/galaxyp/openms_idmassaccuracy/IDMassAccuracy/2.8+galaxy0

Version: 2.8+galaxy0

Version command string: None

Display in tool panel: True

Version lineage of this tool (guids ordered most recent to oldest)

toolshed.g2.bx.psu.edu/repos/galaxyp/openms_idmassaccuracy/IDMassAccuracy/3.1+galaxy0

toolshed.g2.bx.psu.edu/repos/galaxyp/openms_idmassaccuracy/IDMassAccuracy/2.8+galaxy0 (this tool)

toolshed.g2.bx.psu.edu/repos/galaxyp/openms_idmassaccuracy/IDMassAccuracy/2.6+galaxy0

toolshed.g2.bx.psu.edu/repos/galaxyp/openms_idmassaccuracy/IDMassAccuracy/2.5+galaxy0

toolshed.g2.bx.psu.edu/repos/galaxyp/openms_idmassaccuracy/IDMassAccuracy/2.3.0

toolshed.g2.bx.psu.edu/repos/galaxyp/openms_idmassaccuracy/IDMassAccuracy/2.2.0

toolshed.g2.bx.psu.edu/repos/galaxyp/openms_idmassaccuracy/IDMassAccuracy/2.1.0

IDMassAccuracy

Requirements (dependencies defined in the <requirements> tag set)

Requirements:

name

version

type

openms

2.8

package

openms-thirdparty

2.8

package

omssa

2.1.9

package

blast

2.13.0

package

ctdopts

1.4

package

Functional tests

name

inputs

outputs

required files

Test-1

in_cond|in: spectra.mzML
id_in_cond|id_in: MSGFPlusAdapter_1_out.idXML
precursor_error_ppm: False
fragment_error_ppm: False
fragment_mass_tolerance: 0.5
adv_opts|number_of_bins: 10
adv_opts|force: False
adv_opts|test: true
OPTIONAL_OUTPUTS: ['ctd_out_FLAG', 'out_precursor_FLAG', 'out_fragment_FLAG', 'out_precursor_fit_FLAG', 'out_fragment_fit_FLAG']

name: value
name: value
name: value
name: value
name: value

spectra.mzML
MSGFPlusAdapter_1_out.idXML
value