Repository revision
12:f918cb7aefd5

Repository 'openms_idmassaccuracy'
hg clone https://toolshed.g2.bx.psu.edu/repos/galaxyp/openms_idmassaccuracy

IDMassAccuracy tool metadata
Miscellaneous
Calculates a distribution of the mass error from given mass spectra and IDs.
IDMassAccuracy
toolshed.g2.bx.psu.edu/repos/galaxyp/openms_idmassaccuracy/IDMassAccuracy/2.5+galaxy0
2.5+galaxy0
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/galaxyp/openms_idmassaccuracy/IDMassAccuracy/2.6+galaxy0
toolshed.g2.bx.psu.edu/repos/galaxyp/openms_idmassaccuracy/IDMassAccuracy/2.5+galaxy0 (this tool)
toolshed.g2.bx.psu.edu/repos/galaxyp/openms_idmassaccuracy/IDMassAccuracy/2.3.0
toolshed.g2.bx.psu.edu/repos/galaxyp/openms_idmassaccuracy/IDMassAccuracy/2.2.0
toolshed.g2.bx.psu.edu/repos/galaxyp/openms_idmassaccuracy/IDMassAccuracy/2.1.0
IDMassAccuracy
Requirements (dependencies defined in the <requirements> tag set)
name version type
openms 2.5 package
openms-thirdparty 2.5 package
blast 2.9.0 package
openjdk 8.0.192 package
ctdopts 1.4 package
Functional tests
name inputs outputs required files
Test-1 in: spectra.mzML
id_in: MSGFPlusAdapter_1_out.idXML
precursor_error_ppm: False
fragment_error_ppm: False
fragment_mass_tolerance: 0.5
adv_opts_cond|number_of_bins: 10
adv_opts_cond|force: False
adv_opts_cond|test: true
adv_opts_cond|adv_opts_selector: advanced
OPTIONAL_OUTPUTS: ['ctd_out_FLAG', 'out_precursor_FLAG', 'out_fragment_FLAG', 'out_precursor_fit_FLAG', 'out_fragment_fit_FLAG']
name: value
name: value
name: value
name: value
name: value
spectra.mzML
MSGFPlusAdapter_1_out.idXML
value