Galaxy |

Merge tool metadata

Miscellaneous

Name: Merge

Description: MetaPhlAn abundance tables

Id: merge_metaphlan_tables

Guid: toolshed.g2.bx.psu.edu/repos/iuc/merge_metaphlan_tables/merge_metaphlan_tables/4.1.1+galaxy0

Version: 4.1.1+galaxy0

Version command string: metaphlan -v

Display in tool panel: True

Version lineage of this tool (guids ordered most recent to oldest)

toolshed.g2.bx.psu.edu/repos/iuc/merge_metaphlan_tables/merge_metaphlan_tables/4.2.4+galaxy0

toolshed.g2.bx.psu.edu/repos/iuc/merge_metaphlan_tables/merge_metaphlan_tables/4.1.1+galaxy0 (this tool)

toolshed.g2.bx.psu.edu/repos/iuc/merge_metaphlan_tables/merge_metaphlan_tables/4.0.6+galaxy3

toolshed.g2.bx.psu.edu/repos/iuc/merge_metaphlan_tables/merge_metaphlan_tables/4.0.6+galaxy2

toolshed.g2.bx.psu.edu/repos/iuc/merge_metaphlan_tables/merge_metaphlan_tables/4.0.6+galaxy1

toolshed.g2.bx.psu.edu/repos/iuc/merge_metaphlan_tables/merge_metaphlan_tables/4.0.6+galaxy0

toolshed.g2.bx.psu.edu/repos/iuc/merge_metaphlan_tables/merge_metaphlan_tables/4.0.5+galaxy0

toolshed.g2.bx.psu.edu/repos/iuc/merge_metaphlan_tables/merge_metaphlan_tables/4.0.3+galaxy0

toolshed.g2.bx.psu.edu/repos/iuc/merge_metaphlan_tables/merge_metaphlan_tables/3.0.14+galaxy0

toolshed.g2.bx.psu.edu/repos/iuc/merge_metaphlan_tables/merge_metaphlan_tables/3.0.13+galaxy0

toolshed.g2.bx.psu.edu/repos/iuc/merge_metaphlan_tables/merge_metaphlan_tables/3.0.9+galaxy0

toolshed.g2.bx.psu.edu/repos/iuc/merge_metaphlan_tables/merge_metaphlan_tables/3.0.8+galaxy0

toolshed.g2.bx.psu.edu/repos/iuc/merge_metaphlan_tables/merge_metaphlan_tables/3.0.7+galaxy0

toolshed.g2.bx.psu.edu/repos/iuc/merge_metaphlan_tables/merge_metaphlan_tables/2.6.0.0

merge_metaphlan_tables

Requirements (dependencies defined in the <requirements> tag set)

Requirements:

name

version

type

metaphlan

4.1.1

package

Additional information about this tool

Command:

#for $input in $inputs
        ln -s '$input' '${input.element_identifier}' &&
    #end for

    merge_metaphlan_tables.py
    #for $input in $inputs
        '${input.element_identifier}'
    #end for
    > '$output'

Interpreter: None

Forces a history refresh: False

Functional tests

name

inputs

outputs

required files

Test-1

inputs: ['SRS014464-Anterior_nares-abundances.tabular', 'SRS014464-Anterior_nares-abundances-samefiledifferentname.tabular']

name: value

SRS014464-Anterior_nares-abundances.tabular
SRS014464-Anterior_nares-abundances-samefiledifferentname.tabular
value