| Miscellaneous |
| Version lineage of this tool (guids ordered most recent to oldest) |
| toolshed.g2.bx.psu.edu/repos/iuc/qiime_pick_rep_set/qiime_pick_rep_set/1.9.1.0 (this tool) |
| qiime_pick_rep_set |
| Requirements (dependencies defined in the <requirements> tag set) |
| name | version | type |
| qiime | 1.9.1 | package |
| Functional tests |
| name | inputs | outputs | required files |
| Test-1 |
rep_set_picking_method: first picking|type: de_novo picking|fasta_file: pick_rep_set/seqs.fna input_file: pick_rep_set/seqs_otus.txt sort_by: otu |
attributes: name attributes: name |
pick_rep_set/seqs_otus.txt pick_rep_set/seqs.fna name |
| Test-2 |
input_file: pick_rep_set/seqs_otus.txt rep_set_picking_method: first picking|reference_seqs_fp: pick_rep_set/refseqs.fasta picking|fasta_file: pick_rep_set/seqs.fna sort_by: otu picking|type: preferred |
attributes: name attributes: name |
pick_rep_set/seqs_otus.txt pick_rep_set/refseqs.fasta pick_rep_set/seqs.fna name |
| Test-3 |
rep_set_picking_method: longest picking|type: de_novo picking|fasta_file: pick_rep_set/seqs.fna input_file: pick_rep_set/seqs_otus.txt sort_by: otu |
attributes: name attributes: name |
pick_rep_set/seqs_otus.txt pick_rep_set/seqs.fna name |
| Test-4 |
rep_set_picking_method: most_abundant picking|type: de_novo picking|fasta_file: pick_rep_set/seqs.fna input_file: pick_rep_set/seqs_otus.txt sort_by: otu |
attributes: name attributes: name |
pick_rep_set/seqs_otus.txt pick_rep_set/seqs.fna name |
| Test-5 |
rep_set_picking_method: random picking|type: de_novo picking|fasta_file: pick_rep_set/seqs.fna input_file: pick_rep_set/seqs_otus.txt sort_by: otu |
attributes: name attributes: name |
pick_rep_set/seqs_otus.txt pick_rep_set/seqs.fna name |
| Test-6 |
rep_set_picking_method: first picking|type: de_novo picking|fasta_file: pick_rep_set/seqs.fna input_file: pick_rep_set/seqs_otus.txt sort_by: seq_id |
attributes: name attributes: name |
pick_rep_set/seqs_otus.txt pick_rep_set/seqs.fna name |