Repository revision
18:63dd26468588

Repository 'emboss_5'
hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/emboss_5

est2genome tool metadata
Miscellaneous
est2genome
Align EST and genomic DNA sequences
EMBOSS: est2genome32
toolshed.g2.bx.psu.edu/repos/devteam/emboss_5/EMBOSS: est2genome32/5.0.0.1
5.0.0.1
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/devteam/emboss_5/EMBOSS: est2genome32/5.0.0.1 (this tool)
toolshed.g2.bx.psu.edu/repos/devteam/emboss_5/EMBOSS: est2genome32/5.0.0
EMBOSS: est2genome32
Requirements (dependencies defined in the <requirements> tag set)
name version type
emboss 5.0.0 package
perl 5.26 package
Functional tests
name inputs outputs required files
Test-1 input1: 2.fasta
input2: 1.fasta
match: 1
mismatch: 1
gappenalty: 2
intronpenalty: 40
splicepenalty: 20
minscore: 30
reverse: no
splice: yes
mode: both
best: yes
shuffle: 0
seed: 20825
align: no
width: 50
name: value
2.fasta
1.fasta
value