Repository revision
12:832c20329690

Repository 'emboss_5'
hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/emboss_5

est2genome tool metadata
Miscellaneous
est2genome
Align EST and genomic DNA sequences
EMBOSS: est2genome32
toolshed.g2.bx.psu.edu/repos/devteam/emboss_5/EMBOSS: est2genome32/5.0.0.1
5.0.0.1
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/devteam/emboss_5/EMBOSS: est2genome32/5.0.0.1 (this tool)
toolshed.g2.bx.psu.edu/repos/devteam/emboss_5/EMBOSS: est2genome32/5.0.0
EMBOSS: est2genome32
Requirements (dependencies defined in the <requirements> tag set)
name version type
emboss 5.0.0 package
Functional tests
name inputs outputs required files
Test-1 input2: 1.fasta
gappenalty: 2
input1: 2.fasta
shuffle: 0
reverse: no
intronpenalty: 40
width: 50
splicepenalty: 20
mismatch: 1
best: yes
align: no
seed: 20825
mode: both
splice: yes
minscore: 30
match: 1
out_file1: emboss_est2genome_out.est2genome
2.fasta
1.fasta
emboss_est2genome_out.est2genome