Repository revision
17:ce385837c160

Repository 'emboss_5'
hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/emboss_5

dreg tool metadata
Miscellaneous
dreg
Regular expression search of a nucleotide sequence
EMBOSS: dreg27
toolshed.g2.bx.psu.edu/repos/devteam/emboss_5/EMBOSS: dreg27/5.0.0+galaxy1
5.0.0+galaxy1
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/devteam/emboss_5/EMBOSS: dreg27/5.0.0+galaxy1 (this tool)
toolshed.g2.bx.psu.edu/repos/devteam/emboss_5/EMBOSS: dreg27/5.0.0
EMBOSS: dreg27
Requirements (dependencies defined in the <requirements> tag set)
name version type
emboss 5.0.0 package
perl 5.26 package
Additional information about this tool
dreg -sequence '$input1' -outfile '$out_file1' -pattern '$pattern' -raccshow3 "no" -rusashow3 "no" -rdesshow3 "no" -auto
None
False
Functional tests
name inputs outputs required files
Test-1 input1: 2.fasta
pattern: g[atcg]ctct{2,2}gcc
name: value
2.fasta
value