Repository revision
17:ce385837c160

Repository 'emboss_5'
hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/emboss_5

fuzztran tool metadata
Miscellaneous
fuzztran
Protein pattern search after translation
EMBOSS: fuzztran39
toolshed.g2.bx.psu.edu/repos/devteam/emboss_5/EMBOSS: fuzztran39/5.0.0.1
5.0.0.1
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/devteam/emboss_5/EMBOSS: fuzztran39/5.0.0.1 (this tool)
toolshed.g2.bx.psu.edu/repos/devteam/emboss_5/EMBOSS: fuzztran39/5.0.0
EMBOSS: fuzztran39
Requirements (dependencies defined in the <requirements> tag set)
name version type
emboss 5.0.0 package
perl 5.26 package
Additional information about this tool
fuzztran -sequence '$input1' -outfile '$out_file1' -pattern '$pattern' -pmismatch $mismatch -frame $frame -table $table -rformat2 $out_format1 -auto
None
False
Functional tests
name inputs outputs required files
Test-1 input1: 1.fasta
pattern: AA
mismatch: 0
frame: 6
table: 0
out_format1: excel
name: value
1.fasta
value