Repository revision
17:ce385837c160

Repository 'emboss_5'
hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/emboss_5

maskseq tool metadata
Miscellaneous
maskseq
Mask off regions of a sequence
EMBOSS: maskseq51
toolshed.g2.bx.psu.edu/repos/devteam/emboss_5/EMBOSS: maskseq51/5.0.0
5.0.0
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/devteam/emboss_5/EMBOSS: maskseq51/5.0.0 (this tool)
EMBOSS: maskseq51
Requirements (dependencies defined in the <requirements> tag set)
name version type
emboss 5.0.0 package
perl 5.26 package
Additional information about this tool
maskseq -sequence '$input1' -outseq '$out_file1' -regions '$regions' -tolower $tolower -maskchar '$maskchar' -osformat2 $out_format1 -auto
None
False
Functional tests
name inputs outputs required files
Test-1 input1: 2.fasta
regions: 1-3
tolower: no
maskchar: N
out_format1: fasta
name: value
2.fasta
value