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Repository revision

Revision: 17:ce385837c160

Repository 'emboss_5'

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/emboss_5

newseq tool metadata

Miscellaneous

Name: newseq

Description: Type in a short new sequence

Id: EMBOSS: newseq59

Guid: toolshed.g2.bx.psu.edu/repos/devteam/emboss_5/EMBOSS: newseq59/5.0.0

Version: 5.0.0

Version command string: None

Display in tool panel: True

Version lineage of this tool (guids ordered most recent to oldest)

toolshed.g2.bx.psu.edu/repos/devteam/emboss_5/EMBOSS: newseq59/5.0.0 (this tool)

EMBOSS: newseq59

Requirements (dependencies defined in the <requirements> tag set)

Requirements:

name

version

type

emboss

5.0.0

package

perl

5.26

package

Additional information about this tool

Command:

newseq
      -outseq '$out_file1'
      -name '$seqname'
      -description '$description'
      -type $type
      -sequence '$sequence'
      -osformat5 $out_format1
      -auto

Interpreter: None

Forces a history refresh: False

Functional tests

name

inputs

outputs

required files

Test-1

seqname: cytoc
description: fragment_of_cytochrome_c
type: N
sequence: KKKEERADLIAY
out_format1: fasta

name: value

value