Repository revision
17:ce385837c160

Repository 'emboss_5'
hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/emboss_5

palindrome tool metadata
Miscellaneous
palindrome
Looks for inverted repeats in a nucleotide sequence
EMBOSS: palindrome65
toolshed.g2.bx.psu.edu/repos/devteam/emboss_5/EMBOSS: palindrome65/5.0.0.1
5.0.0.1
None
True
Version lineage of this tool (guids ordered most recent to oldest)
toolshed.g2.bx.psu.edu/repos/devteam/emboss_5/EMBOSS: palindrome65/5.0.0.1 (this tool)
toolshed.g2.bx.psu.edu/repos/devteam/emboss_5/EMBOSS: palindrome65/5.0.0
EMBOSS: palindrome65
Requirements (dependencies defined in the <requirements> tag set)
name version type
emboss 5.0.0 package
perl 5.26 package
Additional information about this tool
palindrome -sequence '$input1' -outfile '$out_file1' -minpallen $minpallen -maxpallen $maxpallen -gaplimit $gaplimit -nummismatches $nummismatches -overlap $overlap -auto
None
False
Functional tests
name inputs outputs required files
Test-1 input1: 2.fasta
minpallen: 10
maxpallen: 100
gaplimit: 100
nummismatches: 0
overlap: yes
name: value
2.fasta
value